SciFig

API reference

Chart generations and edits

Plot publication-ready charts from your data, then change them with follow-up instructions.

Form fields#

POST /charts/generations takes multipart/form-data. Required scope: charts:generate.

FieldTypeRequiredDefaultRules
datafileyes—CSV, TSV, TXT, XLSX or XLS, up to 8 MB, with a header row; the delimiter of CSV, TSV and TXT (comma, tab or semicolon) is detected
requeststringyes—What to plot, in plain language; 1–16,000 characters
chart_typesstringnochosen from the dataComma-separated or a JSON array; see the list below
journal_stylestringnodefaultdefault, nature, science, cell, plos or acs
figure_widthstringnodoublesingle, onehalf or double column; PLOS and ACS have no onehalf
color_palettestringnookabe_itookabe_ito, wong, tol_bright, tol_muted, nature, science, nejm, lancet or jama
sheet_namestringfor workbooks with several sheets—The worksheet to plot from an XLSX or XLS file (1–255 characters)

Data errors#

  • The data is parsed before anything is created, with the same parser as the website. Data that cannot be read returns 400 INVALID_REQUEST with details.field = data and the parser’s code in details.reason (for example DATACHART_CSV_INVALID, DATACHART_TOO_MANY_ROWS); no job runs and no credits are used.
  • A workbook with several sheets and no sheet_name returns 400 INVALID_REQUEST (DATACHART_WORKSHEET_REQUIRED) with the sheet names in details.sheet_names; send the request again with sheet_name. An unknown sheet_name returns DATACHART_WORKSHEET_INVALID, also with details.sheet_names.
  • A file type outside the list returns UNSUPPORTED_DATA_FORMAT; a file over the size limit returns DATA_FILE_TOO_LARGE.
  • Each new data file counts against the website’s upload limits; beyond them the answer is 429 RATE_LIMITED (UPLOAD_RATE_LIMITED or UPLOAD_DAILY_LIMIT_REACHED). Retrying the same key does not count the file again.

Chart types#

bar, line, scatter, dot, frequency_dot, pie, nested_pie, timeseries, waterfall, stacked_area, radar, boxplot, violin, histogram, density, raincloud, beeswarm, qq, ogive, ecdf, ridgeline, regression, errorbar, correlation, bland_altman, funnel, standard_curve, bubble, hexbin, paired_dot, volcano, kaplan_meier, forest, roc, manhattan, ma_plot, enrichment, dose_response, growth_curve, enzyme_kinetics, precision_recall, calibration_curve, confusion_matrix, heatmap, dendrogram, upset, sankey, stem_leaf, calendar_heatmap

Output and credits#

100 credits per chart. A succeeded job has PNG, PDF, TIFF and EPS outputs of the same figure, sized for the journal column. Each output carries editor_url, which opens the chart in its DataChart conversation on the website.

Edits#

POST /charts/edits with JSON {"job": "<chart job id>", "instruction": "..."} changes the chart that job produced, keeping its data, chart types, journal style and palette. instruction is 1–16,000 characters. 100 credits, as in the workspace.

  • The job must be one of your chart jobs, otherwise 400 INVALID_REQUEST (JOB_NOT_FOUND). If it failed, the answer is 400 INVALID_REQUEST (JOB_NOT_SUCCEEDED).
  • If it is still running, the answer is 409 REVISION_CONFLICT with details.reason = PARENT_JOB_RUNNING and Retry-After. This one is retryable: send the same request with the same key once the job has finished.
  • Only the latest version can be edited, as in the workspace. Edit the newest job of the chain; an older one returns 409 REVISION_CONFLICT (NOT_LATEST_REVISION), also when a newer version was made on the website or another edit of the same version was accepted first.
  • One edit at a time: while an edit of the current version is still running, another returns 409 REVISION_CONFLICT (EDIT_IN_PROGRESS). Wait for the running job, then edit its result.
  • A chart made on the website before the current chart format cannot be continued through the API: 400 INVALID_REQUEST (JOB_NOT_EDITABLE).
  • Edits made through the API appear in the same DataChart conversation on the website.

cURL#

curl -X POST https://scifig.ai/api/v1/charts/generations \
  -H "Authorization: Bearer $SCIFIG_API_KEY" \
  -H "Idempotency-Key: $(uuidgen)" \
  -H "Prefer: wait=25" \
  -F "data=@measurements.csv" \
  -F "request=Box plot of response by group with individual points" \
  -F "journal_style=nature"

JavaScript#

import { readFile } from 'node:fs/promises';

const form = new FormData();
form.set('data', new Blob([await readFile('measurements.csv')]), 'measurements.csv');
form.set('request', 'Box plot of response by group with individual points');
form.set('journal_style', 'nature');

const response = await fetch('https://scifig.ai/api/v1/charts/generations', {
  method: 'POST',
  headers: {
    Authorization: `Bearer ${process.env.SCIFIG_API_KEY}`,
    'Idempotency-Key': crypto.randomUUID(),
    Prefer: 'wait=25',
  },
  body: form,
});
const result = await response.json();
console.log(response.status, result);

Python#

import os
import uuid

import requests

headers = {
    "Authorization": f"Bearer {os.environ['SCIFIG_API_KEY']}",
    "Idempotency-Key": str(uuid.uuid4()),
    "Prefer": "wait=25",
}
response = requests.post(
    "https://scifig.ai/api/v1/charts/generations",
    headers=headers,
    files={"data": open("measurements.csv", "rb")},
    data={"request": "Box plot of response by group with individual points", "journal_style": "nature"},
    timeout=60,
)
print(response.status_code, response.json())